Applications > fftw3

Publications

Users of this package associated the following 100 publications with the XSEDE allocation/account under which they were running this software. Thus the publications may have come before or after the runs of this software, but the authors considered them to be related to the same line of research.

  • Walter Freeman (University of Arizona), Douglas Toussaint (University of Arizona), (2010) "Improved method for calculating nucleon strangeness", Lattice 2010 Villasimius, Sardinia Italy , . http://arxiv.org/pdf/1011.5271.pdf
  • T. Burch (University of Utah), Carleton DeTar (University of Utah), M. Di Pierro (DePaul U.), A. X. El-Khadra (U. of Illinois), Steven Gottlieb (Indiana University), A. Kronfeld (Fermi National Accelerator Laboratory), Ludmila Levkova (University of Utah), Paul Mackenzie (Fermi National Accelerator Laboratory), James Simone (Fermi National Accelerator Laboratory), (2009) "Quarkonium mass splittings with Fermilab heavy quarks and 2+1 flavors of improved staggered sea quarks", Lattice 2009 Beijing, China , . http://arxiv.org/pdf/0911.0361.pdf
  • Evgeni Penev, Joel Ireta, Joan-Emma Shea, (2008) "Energetics of Infinite Homopolypeptide Chains: A New Look at Commonly Used Force Fields", The Journal of Physical Chemistry B 112 / 22, 6872-6877. http://dx.doi.org/10.1021/jp800058f
  • D. Du (U. of Iowa), Carleton DeTar (University of Utah), A. Kronfeld (Fermi National Accelerator Laboratory), John Laiho (U. of Glasgow), Y. Meurice (U. of Iowa), S.-W. Qiu (University of Utah), (2011) "Semileptonic form factor ratio B_s --> D_s/B --> D and its application to BR(B^0_s --> mu^+ mu^-)", Lattice 2011 Squaw Valley, CA , . http://arxiv.org/pdf/1111.1796.pdf
  • C. Bouchard (U. of Illinois), E. Freeland (Benedictine U.), Claude Bernard (Washington University in St. Louis), A. X. El-Khadra (U. of Illinois), E. Gamiz (U. de Granada), A. Kronfeld (Fermi National Accelerator Laboratory), John Laiho (Washington University in St. Louis), Ruth Van de Water (Brookhaven National Laboratory), (2011) "Neutral B mixing from 2+1 flavor lattice-QCD: the Standard Model and beyond", Lattice 2011 Squaw Valley, CA , . http://arxiv.org/pdf/1112.5642.pdf
  • S.-W. Qiu (University of Utah), Carleton DeTar (University of Utah), D. Du (U. of Iowa), A. Kr (Fermi National Accelerator Laboratory), John Laiho (U. of Glasgow), Ruth Van de Water (Brookhaven National Laboratory), (2011) "Semileptonic B to D decays at nonzero recoil with 2+1 flavors of improved staggered quarks", Lattice 2011 Squaw Valley, CA , . http://arxiv.org/pdf/1111.0677.pdf
  • G. Shi (U. of Illinois), Steven Gottlieb (Indiana University), A. Torok (Indiana University), V. Kindratenko (U. of Illinois), (2011) "Design of MILC lattice QCD application for GPU clusters", 25th IEEE International Parallel & Distributed Processing Symposium, (IEEE IPDPS 2011) Anchorage, AK , .
  • A. Torok (Indiana University), S. Basak (Orissa, India), V. Kindratenko (U. of Illinois), G. Shi (U. of Illinois), Alexei Bazavov (Brookhaven National Laboratory), Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), E. Freeland (U. of Illinois), Walter Freeman (University of Arizona), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), John Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), M. Oktay (University of Utah), James Osborn (Argonne National Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Fermi National Accelerator Laboratory), (2010) "Electromagnetic splitting of charged and neutral mesons", Lattice 2010 Villasimius, Sardinia Italy , . http://pos.sissa.it//archive/conferences/105/127/Lattice%202010_127.pdf
  • David G Ackerman (Cornell University), Frederick A Heberle (Oak Ridge National Laboratory), Gerald W Feigenson (Cornell University), (April2013) "Limited Perturbation of a DPPC Bilayer by Fluorescent Lipid Probes: A Molecular Dynamics Study", The Journal of Physical Chemistry B 117 / 17, 4844-4852. http://dx.doi.org/10.1021/jp400289d
  • Parvez Sukheswalla (Cornell University), (August2013) "Simulation of homogeneous turbulent shear flow at higher Reynolds numbers: numerical challenges and a remedy", Journal of Turbulence 14 / 5, 60-97. http://dx.doi.org/10.1080/14685248.2013.817677
  • Carleton DeTar (University of Utah), A. Kronfeld (Fermi National Accelerator Laboratory), S.-H. Lee (University of Utah), Ludmila Levkova (University of Utah), D. Mohler (Ferm), James Simone (Fermi National Accelerator Laboratory), (2012) "Charmonium mass splittings at the physical point", Lattice 2012 Cairns, Australia , . http://arxiv.org/pdf/1211.2253.pdf
  • Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), M. Di Pierro (DePaul U.), A. El-Khadra (U. of Illinois), R. Evans (U. of Illinois), E. Freeland (Art Institute of Chicago), E. Gamiz (U. of Illinois), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), A. Kronfeld (Fermi National Accelerator Laboratory), John Laiho (Washington University in St. Louis), Ludmila Levkova (University of Utah), Paul Mackenzie (Fermi National Accelerator Laboratory), M. Okamoto (Fermi National Accelerator Laboratory), James Simone (Fermi National Accelerator Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Fermi National Accelerator Laboratory), (January2009) "B¯→D*ℓν¯ form factor at zero recoil from three-flavor lattice QCD: A model independent determination of |Vcb|", Physical Review D 79 / 1, . http://dx.doi.org/10.1103/PhysRevD.79.014506
  • Shawn P Coleman (University of Arkansas), Mehrdad M. M Sichani, Douglas E Spearot (University of Arkansas), (2014) "A Computational Algorithm to Produce Virtual X-ray and Electron Diffraction Patterns from Atomistic Simulations", JOM 66 / 3, 408-416. http://dx.doi.org/10.1007/s11837-013-0829-3
  • Subhasish Basak (Indiana University), Alexei Bazavov (Brookhaven National Laboratory), Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), E. Freeland (Benedictine U.), Walter Freeman (George Washington University), Justin Foley (University of Utah), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), John Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), M. Oktay (University of Utah), James Osborn (Argonne National Laboratory), Robert Sugar (University of California-Santa Barbara), Aaron Torok (Indiana University), Douglas Toussaint (University of Arizona), Ruth Van de Water (Fermi National Accelerator Laboratory), Ran Zhou (Indiana University), (2013) "Electromagnetic contributions to pseudoscalar masses", 7th International Workshop on Chiral Dynamics Newport News, Virginia, USA , . http:arxiv.org/pdf/1301.7137.pdf
  • Apratim Bhattacharya (Lehigh University), Robert B. Best, Jeetain Mittal (Lehigh University), (2012) "Smoothing of the GB1 Hairpin Folding Landscape by Interfacial Confinement", Biophysical Journal 103 / 3, 596-600. http://dx.doi.org/10.1016/j.bpj.2012.07.005
  • Robert B. Best, Jeetain Mittal (Lehigh University), Michael Feig (Michigan State University), Alexander D. MacKerell, Jr. (University of Maryland, Baltimore County), (2012) "Inclusion of Many-Body Effects in the Additive CHARMM Protein CMAP Potential Results in Enhanced Cooperativity of α-Helix and β-Hairpin Formation", Biophysical Journal 103 / 5, 1045-1051. http://dx.doi.org/10.1016/j.bpj.2012.07.042
  • Steven Gottlieb (Indiana University), G. Shi (U. of Illinois), A. Torok (Indiana University), V. Kindratenko (U. of Illinois), (2010) "QUDA Programming for Staggered Quarks", Lattice 2010 Villasimius, Sardinia Italy , . http://pos.sissa.it/archive/conferences/105/026/Lattice 2010_026.pdf
  • Georgios A Tritsaris (Harvard University), Brad D Malone (Harvard University), Efthimios Kaxiras (Harvard University), (June2014) "Structural stability and electronic properties of low-index surfaces of SnS", Journal of Applied Physics 115, 173702. http://dx.doi.org/10.1063/1.4874775
  • R. Babich (Boston U.), m. Clark (Harvard-Smithsonian Center for Astrophysics), Balint Joo (Jefferson Laboratory), G. Shi (U. of Illinois), Richard Brower (Boston University), Steven Gottlieb (Indiana University), (2011) "Scaling Lattice QCD beyond 100 GPUs", 2011 ACM/IEEE International Conference for High Performance Computing, Networking, Storage and Analysis (SC11) Seattle, WA , . http://arxiv.org/pdf/1109.2935.pdf
  • Qiangjun Zhou, Jiangmei Li, Hang Yu, Yujia Zhai, Zhen Gao, Yanxin Liu, Xiaoyun Pang, Lunfeng Zhang, Klaus Schulten, Fei Sun, Chang Chen, (March2014) "Molecular insights into the membrane-associated phosphatidylinositol 4-kinase IIα", Nature Communications 5, 3552. http://dx.doi.org/10.1038/ncomms4552
  • Y. Wang, Yanxin Liu, H. A. DeBerg, T. Nomura, M. T. Hoffman, P. R. Rohde, K. Schulten, B. Martinac, P. R. Selvin, (February2014) "Single molecule FRET reveals pore size and opening mechanism of a mechano-sensitive ion channel", eLife 3, e01834-e01834. http://dx.doi.org/10.7554/eLife.01834
  • Yanxin Liu, Maxim B. Prigozhin, Klaus Schulten, Martin Gruebele, (March2014) "Observation of Complete Pressure-Jump Protein Refolding in Molecular Dynamics Simulation and Experiment", Journal of the American Chemical Society 136 / 11, 4265-4272. http://dx.doi.org/10.1021/ja412639u
  • Nicholas Malaya, Karl Schulz (University of Texas at Austin), (April2012) "Early Experiences Porting Scientific Applications to the Many Integrated Core (MIC) Platform", TACC-Intel Highly-Parallel Computing Symposium TACC, Austin, TX , .
  • Todd A. Oliver, Nicholas Malaya, Rhys Ulerich, Robert D. Moser, (2014) "Estimating uncertainties in statistics computed from direct numerical simulation", Physics of Fluids 26 / 3, 035101. http://dx.doi.org/10.1063/1.4866813
  • Claude Bernard (Washington University in St. Louis), (March2013) "Neutral B mixing in staggered chiral perturbation theory", Physical Review D 87 / 11, . http://dx.doi.org/10.1103/PhysRevD.87.114503
  • Kai Zhang, Li Wang, Yanxin Liu, Kwok-Yan Chan, Xiaoyun Pang, Klaus Schulten, Zhiyang Dong, Fei Sun, (June2013) "Flexible interwoven termini determine the thermal stability of thermosomes", Protein & Cell 4 / 6, 432-444. http://dx.doi.org/10.1007/s13238-013-3026-9
  • J. Bailey (Seoul National University), Alexei Bazavov (Brookhaven National Laboratory), A. X. El-Khadra (U. of Illinois), Steven Gottlieb (Indiana University), R. Jain (U. of Illinois), A. Kronfeld (Fermi National Accelerator Laboratory), Ruth Van de Water (Fermi National Accelerator Laboratory), Ran Zhou (Indiana University), (2011) "D semileptonic form factors and |V_{cs}(d)| from 2+1 flavor lattice QCD", Lattice 2011 Squaw Valley, CA , . http://arxiv.org/pdf/1111.5471.pdf
  • Noa Marom (University of Texas at Austin), Jonathan Moussa (University of Texas at Austin), Xinguo Ren, Alexandre Tkatchenko, James Chelikowsky (University of Texas at Austin), (December2011) "Electronic structure of dye-sensitized TiO_{2} clusters from many-body perturbation theory", Physical Review B 84 / 24, 245115. http://dx.doi.org/10.1103/PhysRevB.84.245115
  • Noa Marom (University of Texas at Austin), Xinguo Ren, Jonathan Moussa (University of Texas at Austin), James Chelikowsky (University of Texas at Austin), Leeor Kronik, (2011) "Electronic structure of copper phthalocyanine from G_{0}W_{0} calculations", Physical Review B 84 / 19, 195143. http://dx.doi.org/10.1103/PhysRevB.84.195143
  • Alexei Bazavov (University of Arizona), Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), X. Du (Washington U.), Walter Freeman (University of Arizona), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), John Laiho (Washington University in St. Louis), Ludmila Levkova (University of Utah), M. Oktay (University of Utah), James Osborn (Argonne National Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (2009) "Results from the MILC collaboration's SU(3) chiral perturbation theory analysis", Lattice 2009 Beijing, China , . http://arxiv.org/pdf/0910.3618.pdf
  • Alexei Bazavov (University of Arizona), Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), X. Du (Washington U.), Walter Freeman (University of Arizona), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), John Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), M. Oktay (University of Utah), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (2010) "Staggered chiral perturbation theory in the two-flavor case and SU(2) analysis of the MILC data", Lattice 2010 Villasimius, Sardinia Italy , . http://arxiv.org/pdf/1011.1792.pdf
  • Ludmila Levkova (University of Utah), Carleton DeTar (University of Utah), (April2011) "Charm annihilation effects on the hyperfine splitting in charmonium", Physical Review D 83 / 7, . http://dx.doi.org/10.1103/PhysRevD.83.074504
  • Alexei Bazavov (University of Arizona), Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), Walter Freeman (University of Arizona), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), John Laiho (Washington University in St. Louis), Ludmila Levkova (University of Utah), James Osborn (Argonne National Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (2009) "Progress on four flavor QCD with the HISQ action", Lattice 2009 Beijing, China , . http://arxiv.org/pdf/0911.0869.pdf
  • Ran Zhou (Indiana University), J. Bailey (Seoul National University), Alexei Bazavov (Brookhaven National Laboratory), A. X. El-Khadra (U. of Illinois), Steven Gottlieb (Indiana University), R. Jain (U. of Illinois), A. Kronfeld (Fermi National Accelerator Laboratory), Ruth Van de Water (Fermi National Accelerator Laboratory), (2011) "Form factors for B to Kll semileptonic decay from three-flavor lattice QCD", Lattice 2011 Squaw Valley, CA , . http://arxiv.org/pdf/1111.0981.pdf
  • Alexei Bazavov (University of Arizona), Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), X. Du (Washington U.), Walter Freeman (University of Arizona), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), John Laiho (Washington University in St. Louis), Ludmila Levkova (University of Utah), M. Oktay (University of Utah), James Osborn (Argonne National Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (2009) "MILC results for light pseudoscalars", Lattice 2009 Beijing, China , . http://arxiv.org/pdf/0910.2966.pdf
  • M. B. Prigozhin, Yanxin Liu, A. J. Wirth, S. Kapoor, R. Winter, K. Schulten, M. Gruebele, (May2013) "Misplaced helix slows down ultrafast pressure-jump protein folding", Proceedings of the National Academy of Sciences 110 / 20, 8087-8092. http://dx.doi.org/10.1073/pnas.1219163110
  • Claude Bernard (Washington University in St. Louis), Maarten Golterman (San Francisco State University), (2013) "On the foundations of partially quenched chiral perturbation theory", Physical Review D 88 / 1, . http://dx.doi.org/10.1103/PhysRevD.88.014004
  • Noa Marom (University of Texas at Austin), Minjung Kim (University of Texas at Austin), James Chelikowsky (University of Texas at Austin), (2012) "Structure Selection Based on High Vertical Electron Affinity for TiO_{2} Clusters", Physical Review Letters 108 / 10, 106801. http://dx.doi.org/10.1103/PhysRevLett.108.106801
  • Xueqing Zou, Yanxin Liu, Zhongzhou Chen, Gloria Ines Cárdenas-Jirón, Klaus Schulten, (August2010) "Flow-Induced β-Hairpin Folding of the Glycoprotein Ibα β-Switch", Biophysical Journal 99 / 4, 1182-1191. http://dx.doi.org/10.1016/j.bpj.2010.05.035
  • Alexei Bazavov (Brookhaven National Laboratory), Claude Bernard (Washington University in St. Louis), J. Komijani (Washington U.), Carleton DeTar (University of Utah), Ludmila Levkova (University of Utah), Walter Freeman (George Washington University), Steven Gottlieb (Indiana University), Ran Zhou (Indiana U.), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), John Laiho (U. of Glasgow), James Osborn (Argonne National Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Fermi National Accelerator Laboratory), (March2013) "Lattice QCD ensembles with four flavors of highly improved staggered quarks", Physical Review D 87 / 5, . http://dx.doi.org/10.1103/PhysRevD.87.054505
  • Luca Larini (Rutgers, the State University of New Jersey), Joan-Emma Shea (University of California-Santa Barbara), (2013) "Double Resolution Model for Studying TMAO/Water Effective Interactions", The Journal of Physical Chemistry B 117 / 42, 13268-13277. http://dx.doi.org/10.1021/jp403635g
  • Alexei Bazavov (University of Arizona), C. Bouchard (U. of Illinois), Carleton DeTar (University of Utah), A. X. El-Khadra (U. of Illinois), E. Freeland (Washington U.), E. Gamiz (Fermi National Accelerator Laboratory), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), A. Kronfeld (Fermi National Accelerator Laboratory), John Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), Paul Mackenzie (Fermi National Accelerator Laboratory), M. Oktay (University of Utah), James Simone (Fermi National Accelerator Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (2010) "Semileptonic decays of K and D mesons in 2+1 flavor QCD", Lattice 2010 Villasimius, Sardinia Italy , . http://arxiv.org/pdf/1011.2423.pdf
  • Carleton DeTar (University of Utah), Urs Heller (American Physical Society), (2009) "QCD thermodynamics from the lattice", The European Physical Journal A 41 / 3, 405-437. http://dx.doi.org/10.1140/epja/i2009-10825-3
  • Georgios A Tritsaris (Harvard University), Brad D Malone (Harvard University), Efthimios Kaxiras (Harvard University), (2013) "Optoelectronic Properties of Single-layer, Double-layer and Bulk Tin Sulfide: A Theoretical Study", Journal of Applied Physics , .
  • T. Burch (U. of Utah), Carleton DeTar (University of Utah), M. Di Pierro (DePaul U.), A. X. El-Khadra (U. of Illinois), E. D. Freeland (Benedictine U.), Steven Gottlieb (Indiana University), A. S. Kronfeld (Fermi National Accelerator Laboratory), Ludmila Levkova (University of Utah), Paul Mackenzie (Fermi National Accelerator Laboratory), James Simone (Fermi National Accelerator Laboratory), (2010) "Quarkonium mass splittings in three-flavor lattice QCD", Physical Review D 81 / 3, . http://dx.doi.org/10.1103/PhysRevD.81.034508
  • Luca Larini (University of California-Santa Barbara), Lanyuan Lu (University of Utah), Gregory Voth (University of Chicago), (April2010) "The multiscale coarse-graining method. VI. Implementation of three-body coarse-grained potentials", The Journal of Chemical Physics 132 / 16, 164107. http://dx.doi.org/10.1063/1.3394863
  • Pui-kuen Yeung (Georgia Institute of Technology), Diego Donzis (Texas A&M University), K. R. Sreenivasan, (June2012) "Dissipation, enstrophy and pressure statistics in turbulence simulations at high Reynolds numbers", Journal of Fluid Mechanics 700 / undefined, 5-15. http://dx.doi.org/10.1017/jfm.2012.5
  • Luca Larini (University of California-Santa Barbara), Joan-Emma Shea (University of California-Santa Barbara), (July2012) "Coarse-Grained Modeling of Simple Molecules at Different Resolutions in the Absence of Good Sampling", The Journal of Physical Chemistry B 116 / 29, 8337-8349. http://dx.doi.org/10.1021/jp2097263
  • Akshaya Shankar (Lehigh University), Anand Jagota (Lehigh University), Jeetain Mittal (Lehigh University), (2012) "DNA Base Dimers Are Stabilized by Hydrogen-Bonding Interactions Including Non-Watson–Crick Pairing Near Graphite Surfaces", The Journal of Physical Chemistry B 116 / 40, 12088-12094. http://dx.doi.org/10.1021/jp304260t
  • Brett Olsen (Washington University in St. Louis), Paul H. Schlesinger (Washington University in St. Louis), Daniel S. Ory (Washington University in St. Louis), Nathan A. Baker (Pacific Northwest National Labs), (2011) "25-Hydroxycholesterol Increases the Availability of Cholesterol in Phospholipid Membranes", Biophysical Journal , .
  • Alexei Bazavov (Brookhaven National Laboratory), Claude Bernard (Washington University in St. Louis), C. Bouchard (Ohio State U.), Carleton DeTar (University of Utah), D. Du (U. of Illinois), A. X. El-Khadra (U. of Illinois), Justin Foley (University of Utah), E. Freeland (Benedictine U.), E. Gamiz (U. de Granada), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), J. Kim (U. of Arizona), A. Kronfeld (Fermi National Accelerator Laboratory), John Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), M. Lightman (Washington U.), Paul Mackenzie (Fermi National Accelerator Laboratory), E. Neil (Fermi National Accelerator Laboratory), M. Oktay (University of Utah), James Simone (Fermi National Accelerator Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Fermi National Accelerator Laboratory), Ran Zhou (Indiana University), (2012) "Pseudoscalar meson physics with four dynamical quarks", Lattice 2012 Cairns, Australia , . http://arxiv.org/pdf/1210.8431.pdf
  • Carleton DeTar (University of Utah), Ludmila Levkova (University of Utah), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), (June2010) "QCD thermodynamics with nonzero chemical potential at N_{t}=6 and effects from heavy quarks", Physical Review D 81 / 11, . http://dx.doi.org/10.1103/PhysRevD.81.114504
  • E. Gamiz (U. de Granada), Carleton DeTar (University of Utah), A. X. El-Khadra (U. of Illinois), A. Kronfeld (Fermi National Accelerator Laboratory), Paul Mackenzie (Fermi National Accelerator Laboratory), James Simone (Fermi National Accelerator Laboratory), (2011) "K --> pi l nu form factors with staggered quarks", Lattice 2011 Squaw Valley, CA , . http://arxiv.org/pdf/1111.2021.pdf
  • Claude Bernard (Washington University in St. Louis), C. Bouchard (U. of Illinois), A. X. El-Khadra (U. of Illinois), E. Free (Benedictine U.), E. Gamiz (Gr), A. Kronfeld (Fermi National Accelerator Laboratory), John Laiho (U. of Glasgow), Ruth Van de Water (Fermi National Accelerator Laboratory), (2011) "B Mixing in the Standard Model and Beyond: Lattice QCD", 19th Particles and Nuclei International Conference (PANIC11) Cambridge, MA , . http://arxiv.org/pdf/1111.2968.pdf
  • Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), M. Di Pierro (DePaul U.), A. El-Khadra (U. of Illinois), R. Evans (U. of Illinois), E. Freeland (Benedictine U.), E. Gamiz (U. de Granada), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), A. Kronfeld (Fermi National Accelerator Laboratory), John Laiho (Washington University in St. Louis), Ludmila Levkova (University of Utah), Paul Mackenzie (Fermi National Accelerator Laboratory), M. Okamoto (Fermi National Accelerator Laboratory), M. Oktay (U. of Utah), James Simone (Fermi National Accelerator Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (August2009) "Visualization of semileptonic form factors from lattice QCD", Physical Review D 80 / 3, . http://dx.doi.org/10.1103/PhysRevD.80.034026
  • Alexei Bazavov (Brookhaven National Laboratory), T. Bhattacharya (Los Alamos National Laboratory), M. Cheng (Lawrence Livermore National Laboratory), N. Christ (Columbia U.), Carleton DeTar (University of Utah), S. Ejiri (Brookhaven National Laboratory), Steven Gottlieb (Indiana University), Rajan Gupta (Los Alamos National Laboratory), Urs Heller (American Physical Society), K. Huebner (Brookhaven National Laboratory), C. Jung (Brookhaven National Laboratory), F. Karsch (Brookhaven National Laboratory), E. Laermann (U. Bielefeld), Ludmila Levkova (University of Utah), C. Miao (Brookhaven National Laboratory), R. Mawhinney (Columbia U.), P. Petreczky (Brookhaven National Laboratory), C. Schmidt (U. Bielefeld), R. Soltz (Lawrence Livermore National Laboratory), W. Soeldner (U. Darmstadt), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Pavlos M. Vranas (Lawrence Livermore National Laboratory), (July2009) "Equation of state and QCD transition at finite temperature", Physical Review D 80 / 1, . http://dx.doi.org/10.1103/PhysRevD.80.014504
  • Luca Larini (University of California-Santa Barbara), Megan Murray Gessel, Nichole E. LaPointe, Thanh Do (University of California-Santa Barbara), Michael Bowers (University of California-Santa Barbara), Stuart C. Feinstein, Joan-Emma Shea (University of California-Santa Barbara), (2013) "Initiation of assembly of tau(273-284) and its ΔK280 mutant: an experimental and computational study", Physical Chemistry Chemical Physics 15 / 23, 8916. http://dx.doi.org/10.1039/C3CP00063J
  • Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), M. Di Pierro (DePaul U.), A. X. El-Khadra (U. of Illinois), R. T. Evans (U. of Illinois), E. D. Freeland (Benedictine U.), E. Gámiz (U. de Granada), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), A. S. Kronfeld (Fermi National Accelerator Laboratory), John Laiho (Washington University in St. Louis), Ludmila Levkova (University of Utah), Paul Mackenzie (Fermi National Accelerator Laboratory), James Simone (Fermi National Accelerator Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (February2011) "Tuning Fermilab heavy quarks in 2+1 flavor lattice QCD with application to hyperfine splittings", Physical Review D 83 / 3, . http://dx.doi.org/10.1103/PhysRevD.83.034503
  • Alexei Bazavov (Brookhaven National Laboratory), Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), Walter Freeman (George Washington University), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), John Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), M. Oktay (U. of Utah), J. Osborn (Lawrence Berkeley National Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (October2010) "Scaling studies of QCD with the dynamical highly improved staggered quark action", Physical Review D 82 / 7, . http://dx.doi.org/10.1103/PhysRevD.82.074501
  • Alexei Bazavov (U. of Arizona), Douglas Toussaint (University of Arizona), Claude Bernard (Washington University in St. Louis), John Laiho (Washington University in St. Louis), B. Billeter (U. of Utah), Carleton DeTar (University of Utah), L. Levkova (U. of Utah), M. B. Oktay (U. of Utah), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), James Osborn (Argonne National Laboratory), Robert Sugar (University of California-Santa Barbara), Ruth Van de Water (Brookhaven National Laboratory), (June2010) "Topological susceptibility with the asqtad action", Physical Review D 81 / 11, . http://dx.doi.org/10.1103/PhysRevD.81.114501
  • Yanxin Liu, Jen Hsin, HyeongJun Kim, Paul R. Selvin, Klaus Schulten, (June2011) "Extension of a Three-Helix Bundle Domain of Myosin VI and Key Role of Calmodulins", Biophysical Journal 100 / 12, 2964-2973. http://dx.doi.org/10.1016/j.bpj.2011.05.010
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  • Dooho Choi, Chang Kim, Doron Naveh (Carnegie Mellon University), Suk Chung, Andrew Warren, Noel Nuhfer, Michael Toney, Kevin Coffey, Katayun Barmak, (2012) "Electron mean free path of tungsten and the electrical resistivity of epitaxial (110) tungsten films", Physical Review B 86 / 4, . http://dx.doi.org/10.1103/PhysRevB.86.045432
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  • Alexei Bazavov (University of Arizona), Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), X. Du (Washington U.), Walter Freeman (University of Arizona), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), John Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), M. Oktay (University of Utah), James Osborn (Argonne National Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (2010) "Results for light pseudoscalar mesons", Lattice 2010 Villasimius, Sardinia Italy , . http://arxiv.org/pdf/1012.0868.pdf
  • Alexei Bazavov (University of Arizona), Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), Walter Freeman (University of Arizona), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), John Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), M. Okt (University of Utah), James Osborn (Argonne National Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Fermi National Accelerator Laboratory), (2010) "Simulations with dynamical HISQ quarks", Lattice 2010 Villasimius, Sardinia Italy , . http://arxiv.org/pdf/1012.1265.pdf
  • Sara Nichols (University of California-San Diego), Carlos Hernandez (Stanford University), Yi Wang (University of California-San Diego), James McCammon (University of California-San Diego), (June2013) "Structure-based network analysis of an evolved G protein-coupled receptor homodimer interface", Protein Science 22 / 6, 745-754. http://dx.doi.org/10.1002/pro.2258
  • Subhasish Basak (Indiana University), Alexei Bazavov (Brookhaven National Laboratory), Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), E. Freeland (Benedictine U.), Walter Freeman (George Washington University), Justin Foley (University of Utah), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), John Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), M. Oktay (U. of Utah), James Osborn (Argonne National Laboratory), Robert Sugar (University of California-Santa Barbara), Aaron Torok (Indiana University), Douglas Toussaint (University of Arizona), Ruth Van de Water (Fermi National Accelerator Laboratory), Ran Zhou (Indiana University), (2012) "Status of the MILC calculation of electromagnetic contributions to pseudoscalar masses", Lattice 2012 Cairns, Australia , . http://arxiv.org/pdf/1210.8157.pdf
  • Alexei Bazavov (Brookhaven National Laboratory), Claude Bernard (Washington University in St. Louis), C. Bouchard (U. of Illinois), Carleton DeTar (University of Utah), D. Du (U. of Illinois), A. X. El-Khadra (U. of Illinois), Justin Foley (University of Utah), E. Freeland (Benedictine U.), E. Gamiz (U. de Granada), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), J. Kim (University of Arizona), A. Kronfeld (Fermi National Accelerator Laboratory), John Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), M. Lightman (Washington U.), Paul Mackenzie (Fermi National Accelerator Laboratory), E. Neil (Fermi National Accelerator Laboratory), M. Oktay (University of Utah), James Simone (Fermi National Accelerator Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Fermi National Accelerator Laboratory), Ran Zhou (Indiana University), (2012) "Two-point Correlator Fits on HISQ Ensembles", Lattice 2012 Cairns, Australia , . http://arxiv.org/pdf/1212.0613.pdf
  • Alexei Bazavov (Brookhaven National Laboratory), Claude Bernard (Washington University in St. Louis), C. M. Bouchard (U. of Illinois), Carleton DeTar (University of Utah), M. Di Pierro (DePaul U.), A. X. El-Khadra (U. of Illinois), R. T. Evans (U. of Illinois), E. D. Freeland (Benedictine U.), E. Gámiz (U. de Granada), Steven Gottlieb (Indiana University), U. M. Heller (American Physics Society), James Hetrick (University of the Pacific), R. Jain (U. of Illinois), A. S. Kronfeld (Fermi National Accelerator Laboratory), J. Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), Paul Mackenzie (Fermi National Accelerator Laboratory), E. T. Neil (Fermi National Accelerator Laboratory), M. B. Oktay (U. of Utah), J. N. Simone (Fermi National Accelerator Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (June2012) "B- and D-meson decay constants from three-flavor lattice QCD", Physical Review D 85 / 11, . http://dx.doi.org/10.1103/PhysRevD.85.114506
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  • Alexei Bazavov (Brookhaven National Laboratory), Claude Bernard (Washington University in St. Louis), C. M. Bouchard (Ohio State U.), Carleton DeTar (University of Utah), Daping Du (U. of Illinois), A. X. El-Khadra (U. of Illinois), Justin Foley (University of Utah), E. D. Freeland (Benedictine U.), E. Gámiz (U. de Granada), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), Jongjeong Kim (U. of Arizona), A. S. Kronfeld (Fermi National Accelerator Laboratory), J. Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), Paul Mackenzie (Fermi National Accelerator Laboratory), E. T. Neil (Fermi National Accelerator Laboratory), M. B. Oktay (U. of Utah), Si-Wei Qiu (U. of Utah), J. N. Simone (Fermi National Accelerator Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Fermi National Accelerator Laboratory), Ran Zhou (Indiana U.), (April2013) "Kaon semileptonic vector form factor and determination of |V_{us}| using staggered fermions", Physical Review D 87 / 7, . http://dx.doi.org/10.1103/PhysRevD.87.073012
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  • Alexei Bazavov (Brookhaven National Laboratory), Tanmoy Bhattacharya (Los Alamos National Laboratory), Carleton DeTar (University of Utah), H.-T. Ding (Brookhaven National Laboratory), Steven Gottlieb (Indiana U.), Rajan Gupta (Los Alamos National Laboratory), P. Hegde (Brookhaven National Laboratory), Urs Heller (American Physical Society), F. Karsch (Brookhaven National Laboratory), E. Laermann (U. Bielefeld), Ludmila Levkova (University of Utah), Swagato Mukherjee (Brookhaven National Laboratory), P. Petreczky (Brookhaven National Laboratory), Christian Schmidt (U. Bielefeld), R. A. Soltz (Lawrence Livermore National Laboratory), W. Soeldner (U. Regensberg), Robert Sugar (University of California-Santa Barbara), Pavlos M. Vranas (Lawrence Livermore National Laboratory), (August2012) "Fluctuations and correlations of net baryon number, electric charge, and strangeness: A comparison of lattice QCD results with the hadron resonance gas model", Physical Review D 86 / 3, . http://dx.doi.org/10.1103/PhysRevD.86.034509
  • Alexei Bazavov (Brookhaven National Laboratory), Claude Bernard (Washington University in St. Louis), C. M. Bouchard (U. of Illinois), Carleton DeTar (University of Utah), M. Di Pierro (DePaul U.), A. X. El-Khadra (U. of Illinois), R. T. Evans (U. of Illinois), E. D. Freeland (Benedictine U.), E. Gámiz (U. de Granada), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), R. Jain (U. of Illinois), A. S. Kronfeld (Fermi National Accelerator Laboratory), John Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), Paul Mackenzie (Fermi National Accelerator Laboratory), E. T. Neil (Fermi National Accelerator Laboratory), M. B. Oktay (U. of Utah), J. N. Simone (Fermi National Accelerator Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (August2012) "Neutral B-meson mixing from three-flavor lattice quantum chromodynamics: Determination of the SU(3)-breaking ratio ξ", Physical Review D 86 / 3, . http://dx.doi.org/10.1103/PhysRevD.86.034503
  • Jon A. Bailey (Seoul National University), Alexei Bazavov (Brookhaven National Laboratory), Claude Bernard (Washington University in St. Louis), C. M. Bouchard (Ohio State U.), Carleton DeTar (University of Utah), Daping Du (U. of Illinois), A. X. El-Khadra (U. of Illinois), J. Foley (U. of Utah), E. D. Freeland (Benedictine U.), E. Gámiz (U. de Granada), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), Jongjeong Kim (U. of Arizona), A. S. Kronfeld (Fermi National Accelerator Laboratory), John Laiho (U. of Glasgow), Ludmila Levkova (University of Utah), Paul Mackenzie (Fermi National Accelerator Laboratory), Y. Meurice (U. of Iowa), E. T. Neil (Fermi National Accelerator Laboratory), M. B. Oktay (U. of Utah), Si-Wei Qiu (U. of Utah), J. N. Simone (Fermi National Accelerator Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Fermi National Accelerator Laboratory), Ran Zhou (Indiana U.), (August2012) "Refining New-Physics Searches in B→Dτν with Lattice QCD", Physical Review Letters 109 / 7, . http://dx.doi.org/10.1103/PhysRevLett.109.071802
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  • Alexei Bazavov (University of Arizona), Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), E. Freeland (Washington U.), E. Gamiz (U. of Illinois), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), A. X. El-Khadra (U. of Illinois), A. Kronfeld (Fermi National Accelerator Laboratory), John Laiho (Washington University in St. Louis), Ludmila Levkova (University of Utah), Paul Mackenzie (Fermi National Accelerator Laboratory), M. Oktay (University of Utah), M. Di Pierro (DePaul U.), James Simone (Fermi National Accelerator Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (2009) "The D_s and D^+ Leptonic Decay Constants from Lattice QCD", Lattice 2009 Beijing, China , . http://arxiv.org/pdf/0912.5221.pdf
  • Alexei Bazavov (University of Arizona), Claude Bernard (Washington University in St. Louis), Carleton DeTar (University of Utah), X Du (Washington U.), Walter Freeman (University of Arizona), Steven Gottlieb (Indiana University), Urs Heller (American Physical Society), James Hetrick (University of the Pacific), John Laiho (Washington University in St. Louis), Ludmila Levkova (University of Utah), M. Oktay (University of Utah), James Osborn (Argonne National Laboratory), Robert Sugar (University of California-Santa Barbara), Douglas Toussaint (University of Arizona), Ruth Van de Water (Brookhaven National Laboratory), (2009) "SU(2) chiral fits to light pseudoscalar masses and decay constants", Lattice 2009 Beijing, China , . http://arxiv.org/pdf/0911.0472.pdf
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  • Jonathan Moussa (University of Texas at Austin), Noa Marom (University of Texas at Austin), Na Sai (University of Texas at Austin), James Chelikowsky (University of Texas at Austin), (2012) "Theoretical Design of a Shallow Donor in Diamond by Lithium-Nitrogen Codoping", Physical Review Letters 108 / 22, . http://dx.doi.org/10.1103/PhysRevLett.108.226404
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